PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100150920061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 412aa    MW: 45837.7 Da    PI: 9.0418
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100150920061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.73.9e-15207258155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Ote100150920061|100150920061 207 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 258
                                   57****************988532...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.3E-978178IPR001471AP2/ERF domain
PROSITE profilePS5103211.54883172IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-9130173IPR001471AP2/ERF domain
CDDcd000182.36E-11131174No hitNo description
SuperFamilySSF541715.69E-9134174IPR016177DNA-binding domain
SuperFamilySSF541716.54E-18207268IPR016177DNA-binding domain
PfamPF008474.9E-10207258IPR001471AP2/ERF domain
CDDcd000183.81E-25207268No hitNo description
SMARTSM003801.4E-33208272IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-18208266IPR001471AP2/ERF domain
PROSITE profilePS5103219.177208266IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MGLSMIKNWL RSHAPPPHAA DDEAAPPPPP SSAAGGGXXX XXXXXXXXXX XHSHQTTNCS  60
SVLRVRIVMV VQLSIDGRGD MKHICGIIVA EERDKLGKGG KFREMKNSVI EDSLGCKLTV  120
VHVSHFLECS LRRLFKHTAV YLGGYDKEDK AARSYDLAAL KYWGTTTTTN FPISNYESEL  180
EEMKHMTRQE YVASLRRKSS GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS  240
TQEEAAEAYD IAAIKFRGLN AVTNFEISRY DVRSIMESRN LPIGAGGRRL KDAGKADVAL  300
QIQRTDDSWP GLGFPPAQQP LTLHPYQRXX XXXXXXXXXX XXXXXXQDSD VGFQLGNNHG  360
FLQASMLQLH NLTGLEAEPG PDTGSRDAAY RTLYYQSQSC HGGPTFTMWN GA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077145.11e-111PREDICTED: AP2-like ethylene-responsive transcription factor BBM2
TrEMBLA0A068U6P31e-107A0A068U6P3_COFCA; Uncharacterized protein
STRINGPOPTR_0008s07610.18e-98(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22462457